Like many good detectives, Duke-NUS Integrated Biology and Medicine PhD Programme candidate Ms Allyson Choi was undaunted when she was handed a decades-old cold case: a 1970s outbreak of dengue in the South Pacific.
The outbreak had started with a large cluster of severe cases that had initially been concentrated in Tahiti, New Caledonia, Fiji and the Niue islands. But by the time it spread to Tonga, the majority of patients were asymptomatic, with many experiencing only mild or no illness.
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Determined to get to the bottom of the mystery, Ms Choi set out to analyse the batch of wild-type dengue virus 2 isolates collected by Duke-NUS Emeritus Professor Duane Gubler.
“I wanted to investigate the genetic mutations that might have led to such drastic changes in epidemic outcome,” she explained.
Root cause
Working under Professor Ooi Eng Eong’s supervision at the Duke-NUS Emerging Infectious Diseases Programme, she pinpointed a mutation in the dengue virus’ genome as the root cause, which impaired the virus’ ability to replicate in human cells, resulting in a low virus load and asymptomatic infections in patients.
The very same mutation however, greatly enhanced the virus’ ability to infect the Aedes aegypti mosquitoes, which enabled the virus to be transmitted in Tonga without triggering an outbreak.
“The finding shows that even as little as a single mutation can have profound effects on virus transmission and infection outcome in terms of disease,” explained Prof Ooi.
Learning curve
This study, which forms Ms Choi’s PhD project earned her a publication in Science Translational Medicine:
“It is a great honour. As a student, the learning curve to becoming a competent researcher was steep. Fortunately, my colleagues in Prof Ooi’s lab were tremendously helpful. Prof Ooi was also patient and gave me valuable guidance throughout my project. I am thankful for all the opportunities, people and blessings that have come my way.
“Building on the contributions of many others, I hope this study offers additional value and insight to our understanding of dengue virus evolution.”
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