All Metagenomic articles
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NewsStudy identifies viruses in red tide blooms for the first time
A new study identifies viruses associated with Karenia brevis, the single-celled organism that causes red tide. By testing water samples collected from red tide blooms, the researchers found several viruses in blooms — including one new viral species.
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NewsPlastic-degrading enzymes from landfills
Researchers identified and analysed the structure and predicted functions of potential plastic-degrading enzymes in collected landfills sample from around the world, in an effort to reduce plastic pollution.
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NewsNewly identified bacterial protein helps design cancer drug delivery system
Researchers have identified a previously unknown bacterial protein, the unique structure of which acts as an actin homolog that can be used to design protein nanoparticles for the targeted delivery of anticancer drugs to tumors.
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NewsResearchers develop enhanced method for wastewater surveillance of antibiotic resistance
To better monitor the emergence and spread of antibiotic resistance, researchers have developed a CRISPR-enriched metagenomics method for the enhanced surveillance of antibiotic resistance genes, ARGs, in wastewater.
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NewsStalled microbiomes: cystic fibrosis disrupts early gut development in infants
A new study highlights key differences in the gut microbiome (communities of bacteria) of infants with cystic fibrosis (CF) compared to that of healthy infants, and how these alterations may adversely affect their health.
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NewsOutokumpu’s bedrock reveals a smelly surprise
In a borehole in Finland, volatile organic compounds (VOC) are detected in the bedrock and groundwater due to the presence of a highly diverse underground microbial community, which reflects the composition of VOC and thus the bedrock characteristics.
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NewsAfrica’s largest human microbiome study sheds light on gut diversity and health
The most extensive study of the gut microbiome in Africa has discovered new microbial species and never-before-reported metagenomes from several African sites.
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NewsLooking to Kenya’s Lake Victoria for what may come for Lake Erie
Scientists conducted a genetic survey on cyanobacteria in the Winam Gulf of Kenya’s Lake Victoria, which serves as a model for the cyanobacterial harmful algal blooms (cyanHABs) in Lake Erie under the warming climate.
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NewsStudy takes stock of the known and unknown microbial space
Using publicly available genome sequence data generated over the past three decades, a new study assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.
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OpinionSharing microbial sequence-based data: The way forward
Public sector data associated with health are a highly valuable resource, yet in practice data-sharing poses multiple challenges. Dr Nicola Holden, from AMI’s One Health Scientific Advisory Group, explores the murky morass of big data.
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FeaturesMicrobiome research and a paradigm shift in urban building design
There is increasing evidence that this association between a host and its microbes not only determines health and disease but also influences the behaviour of humans and other animals.
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NewsResearchers develops metagenomic profiling method
Researchers have developed a new k-mer sketching metagenomic profiler, called sylph, that allows scientists to analyze genomic data more quickly and precisely than other profilers.
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NewsWe may be overestimating the association between gut bacteria and disease, study finds
Many bacterial-linked illnesses, such as inflammatory bowel disease or colorectal cancer, are associated with an overgrowth of gut bacteria thought to be bad actors. But when researchers used a machine learning algorithm to predict the density of microbes—called microbial load, from their gut microbiomes, they found that changes in microbial ...
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NewsAI decodes microbes’ message in milk safety testing approach
DNA sequencing combined with artificial intelligence could detect anomalies that signal trouble in dairy production, researchers report.
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NewsGut microbiome influences location and type of immune cells
Researchers have found that different anatomical sections of the gastrointestinal tracts of mice carry different compositions of microbial communities, and the specific makeup of the microbiota can influence the type and abundance of immune cells in any particular region.
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FeaturesWhat a waste: poop and plastic in the study of purple martin microbiomes
Sometimes questions on conservation in research can take multiple forms.
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NewsWastewater could yield thousands of novel viruses, study reveals
Deep metagenomic sequencing of wastewater in Berlin over 17 months shows this technique could help forecast disease outbreaks and monitor the spread of human pathogens. It can also reveal thousands of novel viruses, a new study reveals.
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NewsNew approach to measuring ‘healthy microbiomes’ in nature and the gut
Focusing on four common diseases – diabetes, heart disease, depression and bowel cancer – new research provides insights into the importance of a healthy microbiome balance in the human gut and in the environment.
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NewsLightning, hippos and a spotted hyena: a memorable Functional Metagenomics 2024 meeting
Nearly 70 scientists from 14 countries gathered at Kruger National Park in South Africa to share the latest research in metagenomics, as AMI Healthy Land Scientific Advisory Group member Professor Don Cowan explains.
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News2,000-year-old shipworm mystery solved - its destructive skills are down to bacterial symbionts
Scientists have discovered that a population of symbiotic microbes, living in an overlooked sub-organ of the shipworm gut called the ’typhlosole’, have the ability to secrete the enzymes needed to digest lignin—the toughest part of wood.