All Metagenomic articles
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Fertilizer boosts soil’s ability to lock away carbon
The 180-year experiment at Rothamsted — the world’s longest-running agricultural trial — has revealed that long-term application of nitrogen and phosphorus fertilisers can significantly increase the amount of carbon stored in farmland soils, helping to mitigate climate change.
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How microbial strain variations influence neurobehavior
Microbial single nucleotide variations influence host cognitive behavior by regulating metabolism, a new study of merino sheep reveals.
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AI can be valuable tool to strengthen pandemic preparedness
Artificial intelligence could be a valuable tool for detecting emerging diseases earlier, researchers from five European universities and research institutes argue.
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Vast gut microbiome diversity and antibiotic resistome across 14 mammal species on the Tibetan Plateau
A new study provides the most comprehensive genomic catalogue to date of mammalian gut microbiomes from the Tibetan Plateau.
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Blood microbial DNA distinguishes liver cancer from metastatic lesions
A simple blood test analyzing microbial DNA could help doctors tell apart primary liver cancer from colorectal cancer that has spread to the liver, according to a new study.
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Researchers capture new antibiotic resistance mechanisms with trace amounts of DNA
Scientists have developed a method to isolate genes from amounts of microbial DNA so tiny that it would take 20,000 samples to weigh as much as a single grain of sugar.
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Unlocking the hidden patterns of the gut microbiome with association rule mining
A new study introduces Association Rule Mining (ARM) as a powerful tool to uncover higher-order microbial interactions. The data mining technique allows researchers to identify frequent microbial patterns and their potential health implications.
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International comparison reveals gender differences in antimicrobial resistance
A recent study analysed the DNA map of more than 14,000 gut metagenomes in a global dataset and found differences in antibiotic resistance between genders. In high-income countries, women had more antibiotic resistance genes than men.
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Scientists discover 230 new giant viruses that shape ocean life and health
Using high-performance computing methods, researchers have identified 230 novel giant viruses in publicly available marine metagenomic datasets and characterized their functions.
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Advanced genomics study improves detection of hard-to-find diarrheal infections
A study has used advanced genetic and genomic techniques to offer a major step forward in understanding and diagnosing infectious intestinal diseases. It analysed more than 1,000 stool samples from people with diarrhoeal illness to harness two cutting edge tools.
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Microbial landscape in the early operation phase of China space station
Metagenomics, comparative genomics, and microbial culture techniques were employed to conduct an in-depth analysis of the structure, function, dynamic changes, and adaptation mechanisms of microbial communities within the China Space Station.
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Study identifies viruses in red tide blooms for the first time
A new study identifies viruses associated with Karenia brevis, the single-celled organism that causes red tide. By testing water samples collected from red tide blooms, the researchers found several viruses in blooms — including one new viral species.
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Plastic-degrading enzymes from landfills
Researchers identified and analysed the structure and predicted functions of potential plastic-degrading enzymes in collected landfills sample from around the world, in an effort to reduce plastic pollution.
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Newly identified bacterial protein helps design cancer drug delivery system
Researchers have identified a previously unknown bacterial protein, the unique structure of which acts as an actin homolog that can be used to design protein nanoparticles for the targeted delivery of anticancer drugs to tumors.
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Researchers develop enhanced method for wastewater surveillance of antibiotic resistance
To better monitor the emergence and spread of antibiotic resistance, researchers have developed a CRISPR-enriched metagenomics method for the enhanced surveillance of antibiotic resistance genes, ARGs, in wastewater.
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Stalled microbiomes: cystic fibrosis disrupts early gut development in infants
A new study highlights key differences in the gut microbiome (communities of bacteria) of infants with cystic fibrosis (CF) compared to that of healthy infants, and how these alterations may adversely affect their health.
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Outokumpu’s bedrock reveals a smelly surprise
In a borehole in Finland, volatile organic compounds (VOC) are detected in the bedrock and groundwater due to the presence of a highly diverse underground microbial community, which reflects the composition of VOC and thus the bedrock characteristics.
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Africa’s largest human microbiome study sheds light on gut diversity and health
The most extensive study of the gut microbiome in Africa has discovered new microbial species and never-before-reported metagenomes from several African sites.
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Looking to Kenya’s Lake Victoria for what may come for Lake Erie
Scientists conducted a genetic survey on cyanobacteria in the Winam Gulf of Kenya’s Lake Victoria, which serves as a model for the cyanobacterial harmful algal blooms (cyanHABs) in Lake Erie under the warming climate.
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Study takes stock of the known and unknown microbial space
Using publicly available genome sequence data generated over the past three decades, a new study assesses what fraction of the microbial diversity we know about, and proposes a path forward to curate and cultivate what is still unknown.